Merge pull request 'fix(guardrail): detect and reject manually launched duplicate MCP role servers (#686)' (#925) from fix/issue-686-detect-reject-manual-mcp into master

docs/incidents/670-direct-master-commit-2fa97c26.md

@@ -0,0 +1,83 @@
+# Incident #670: bare direct-to-master commit `2fa97c26` (retroactive audit)
+
+Status: verified; disposition recommendation: **accept as-is, no revert** (final
+disposition owned by controller per issue #670).
+
+## Summary
+
+Commit `2fa97c26fbda555a1a83930ca5fdcea9d8e47b50`
+(`fix(mcp): load dotenv relative to project root`) landed on `prgs/master`
+as a single-parent commit with no PR wrapper and no review record, bypassing
+the sanctioned issue → branch → PR → review → merge workflow. It was
+discovered during the PR #654 post-merge audit. PR #654 itself merged
+cleanly via the Gitea API and did **not** introduce this commit.
+
+## Verification evidence (acceptance criteria 1–3)
+
+- **AC1 — present on `prgs/master`: yes.**
+  `git merge-base --is-ancestor 2fa97c26fbda555a1a83930ca5fdcea9d8e47b50 prgs/master` → true.
+- **AC2 — no PR or review record: confirmed.**
+  The commit is a single-parent, non-merge commit sitting directly on
+  first-parent master between the #629 merge (`5ab5fe85`) and the #654
+  merge (`ec903b0d`). A PR landing on master produces a merge commit (or a
+  PR-linked head); neither exists here. The controller audit at issue-create
+  time also found no PR wrapper and no review record for this SHA.
+- **AC3 — changed files and diff summary: confirmed.**
+  `gitea_auth.py | 5 +++--` (+3/−2). Single parent
+  `5ab5fe8583c07134d55dadf09381aecb67df246e`. The change moves
+  `PROJECT_ROOT` derivation above `load_dotenv()` and loads
+  `.env` relative to the project root instead of the process CWD.
+
+## AC4 — why no immediate revert
+
+- The dotenv fix is intentional and required for correct runtime behavior:
+  without it, `load_dotenv()` resolves `.env` against the process working
+  directory, which breaks MCP server launches whose CWD is not the project
+  root.
+- The change is small (+3/−2), self-contained in `gitea_auth.py`, and has
+  been running on master without incident since 2026-07-10.
+- Reverting would re-introduce a real bug to remove a provenance defect —
+  the wrong trade. Provenance is repaired retroactively by this document,
+  issue #670, and the hardening landed under #671.
+- If the controller later judges the change unsafe, a separate
+  revert/repair issue is the sanctioned path (issue #670, recommended
+  disposition option 4).
+
+## AC5 — workflow-hardening linkage
+
+Prevention already landed: **issue #671** (closed)
+*“Block direct pushes to stable branches from MCP workflow sessions”*,
+implemented by commit `5933d87647656643a67a50331c4c7b06ea751dad`
+(`feat(guard): block direct stable-branch pushes from MCP workflow sessions`).
+
+Shipped guardrails include:
+
+- `gitea_record_stable_branch_push_attempt` — classifies proposed commands
+  for direct stable-branch push intent (`git push <remote> master`,
+  refspecs, `HEAD:master`, `--force`, dry-run intent, `:master` delete),
+  plus root/control-checkout local commits not carried by an issue branch,
+  and writes a durable `stable_branch_contamination` marker.
+- `gitea_audit_stable_branch_contamination` — reconciler-only audit/clear
+  path; a contaminated worker session cannot self-clear.
+- Review/merge/close/completion mutations fail closed while a
+  contamination marker is active.
+
+## AC6 — PR #654 was not the source
+
+- `2fa97c26` is the **first parent** of the #654 merge commit
+  `ec903b0d619e7a27d24aed272a890f4e5d381411`; it predates the #654 merge.
+- First-parent history `5ab5fe8..ec903b0`:
+  `2fa97c2 fix(mcp): load dotenv relative to project root` followed by
+  `ec903b0 Merge pull request 'feat: lifecycle role/hazard labels ... (#603)' (#654)`.
+- The #654 merger audit confirmed `ec903b0d` was a valid Gitea-API merge,
+  the `git push prgs master` attempt during that run was a no-op, and the
+  net change `2fa97c2..ec903b0` contained only the reviewed #603
+  lifecycle-label files.
+- Conclusion: #654 merged reviewed content only; the unauthorized-path
+  defect is solely the earlier bare commit `2fa97c26`.
+
+## Explicit non-actions (unchanged by this audit)
+
+- No revert of `2fa97c26`.
+- No force-push or history rewrite.
+- No master mutation from the audit session.

docs/mcp-namespace-eof-recovery.md

@@ -153,7 +153,19 @@ not a tool argument: a session must never be able to authorize itself.
 ## Related
 
 - #630 — manual daemon killing as contaminated recovery (this contrast, enforced).
+- #657 — restart-path inventory and daemon classification.
+- #686 — manual server launch detection & fail-closed provenance gate.
 - #531 / #544 — stale-runtime detection (`ps`-based); sibling failure mode.
 - #558 / `docs/mcp-daemon-import-guard.md` — why shell imports are not a repair.
 - `docs/mcp-client-registration.md` — per-server registration contract.
 - `docs/mcp-namespace-health.md` — probe sources and mutation enforcement.
+
+## Sanctioned reconnect vs forbidden manual launch (#686)
+
+In addition to manual process killing (#630), manually launching a duplicate role server from an ad hoc shell (`python3 mcp_server.py`) is forbidden and fail-closed:
+
+- **Why manual launches are unsupported:** A terminal-launched `mcp_server.py` holds its own stdio transport; it can never bind to the IDE client's stdio pipes. It cannot restore a dropped IDE namespace, and a manual duplicate process masks stale client-managed runtimes for that profile, defeating stale-runtime gates.
+- **Sanctioned path:** Supported recovery is IDE/client-managed reconnect only (`/mcp reconnect`, IDE restart, or sanctioned reconnect exposure).
+- **Fail-closed enforcement (#686):** Mutating tools on a server lacking client-managed launch provenance (`GITEA_CLIENT_MANAGED=1`) refuse execution fail-closed with typed blocker `unsupported_manual_launch` and an exact next action. Unsupported `GITEA_*` env overrides (e.g. `GITEA_DUMMY`) are surfaced in diagnostics rather than silently ignored.
+- **Inventory & staleness:** Staleness diagnostics ignore non-client-managed duplicates when evaluating runtime freshness and inventory duplicate processes per profile (#657, #686).
+

gitea_config.py

@@ -1169,10 +1169,57 @@ def server_command():
     return python, [os.path.join(root, "mcp_server.py")]
 
 
+RECOGNIZED_GITEA_ENV_KEYS = frozenset({
+    "GITEA_MCP_CONFIG",
+    "GITEA_MCP_PROFILE",
+    "GITEA_PROFILE_NAME",
+    "GITEA_SERVICE",
+    "GITEA_EXECUTION_ROLE",
+    "GITEA_CLIENT_MANAGED",
+    "GITEA_MCP_CLIENT_MANAGED",
+    "GITEA_SERVER_PROVENANCE",
+    "GITEA_AUTHOR_WORKTREE",
+    "GITEA_ACTIVE_WORKTREE",
+    "GITEA_DISABLE_KEYCHAIN",
+    "GITEA_CONTROL_PLANE_DB",
+    "GITEA_DB_PATH",
+    "GITEA_LOG_LEVEL",
+    "GITEA_DEBUG",
+    "GITEA_HMAC_SECRET",
+    "GITEA_IRRECOVERABLE_HMAC_SECRET",
+    "GITEA_FORCE_MCP_RUNTIME_CHECK",
+    "GITEA_FORCE_CLIENT_MANAGED",
+})
+
+RECOGNIZED_GITEA_ENV_PREFIXES = (
+    "GITEA_TOKEN_",
+    "GITEA_PASS_",
+    "GITEA_USER_",
+    "GITEA_URL_",
+    "GITEA_HOST_",
+    "GITEA_REMOTE_",
+    "GITEA_HTTP_HEADER_",
+)
+
+
+def get_unconsumed_gitea_env_overrides(env=None) -> dict[str, str]:
+    """Find unsupported GITEA_* env vars present in *env* (defaults to os.environ)."""
+    target = os.environ if env is None else env
+    unconsumed = {}
+    for key, value in target.items():
+        if key.startswith("GITEA_"):
+            if key in RECOGNIZED_GITEA_ENV_KEYS:
+                continue
+            if any(key.startswith(p) for p in RECOGNIZED_GITEA_ENV_PREFIXES):
+                continue
+            unconsumed[key] = str(value)
+    return unconsumed
+
+
 def launcher_entry(profile_name, config_path=None):
     """Return a thin MCP launcher entry for *profile_name*.
 
-    Contains only command/args and the two GITEA_MCP_* env vars — never a token
+    Contains command/args and the GITEA_MCP_* / GITEA_CLIENT_MANAGED env vars — never a token
     or password. Suitable for Claude / Gemini / Codex ``mcpServers`` blocks.
     """
     command, args = server_command()
@@ -1183,11 +1230,13 @@ def launcher_entry(profile_name, config_path=None):
             "env": {
                 "GITEA_MCP_CONFIG": config_path or DEFAULT_CONFIG_PATH,
                 "GITEA_MCP_PROFILE": profile_name,
+                "GITEA_CLIENT_MANAGED": "1",
             },
         }
     }
 
 
+
 def keychain_set(item_id, token, account=None, runner=subprocess.run):
     """Store *token* in the macOS keychain under service *item_id*.
 

gitea_mcp_server.py

@@ -14585,6 +14585,56 @@ def _session_context_mutation_block(
     return blocked
 
 
+def _is_client_managed_process() -> bool:
+    """Check whether the current MCP server process has client-managed launch provenance (#686)."""
+    val = (
+        os.environ.get("GITEA_CLIENT_MANAGED")
+        or os.environ.get("GITEA_MCP_CLIENT_MANAGED")
+        or os.environ.get("GITEA_SERVER_PROVENANCE")
+        or os.environ.get("GITEA_FORCE_CLIENT_MANAGED")
+        or ""
+    ).strip().lower()
+
+    if val in ("0", "false", "no", "manual", "manual_launch"):
+        return False
+
+    if val in ("1", "true", "yes", "client_managed"):
+        return True
+
+    # A terminal launch has an active TTY on stdin
+    try:
+        if sys.stdin and sys.stdin.isatty():
+            return False
+    except Exception:
+        pass
+
+    # Standard client launch or test runner with stdio pipe and profile env
+    if "GITEA_MCP_CONFIG" in os.environ or "GITEA_MCP_PROFILE" in os.environ or "GITEA_PROFILE_NAME" in os.environ:
+        return True
+
+    return False
+
+
+def _provenance_mutation_block(**extra_fields) -> dict | None:
+    """Refuse mutating tool calls on processes lacking client-managed launch provenance (#686)."""
+    if _is_client_managed_process():
+        return None
+    unconsumed = gitea_config.get_unconsumed_gitea_env_overrides()
+    blocked = {
+        "success": False,
+        "performed": False,
+        "blocker_kind": "unsupported_manual_launch",
+        "reasons": [
+            "mutation denied: server process was launched manually from a terminal without client-managed provenance (fail closed). Manually launched mcp_server.py processes cannot receive IDE stdio or serve workflow mutations."
+        ],
+        "exact_next_action": "BLOCKED + RECONNECT: Reconnect the IDE/client-managed MCP server namespace instead of an ad hoc terminal launch. Hand-launched processes and mcp_config.json hand-edits are classified as workflow contamination.",
+        "provenance": "manual_launch",
+        "unconsumed_gitea_env": unconsumed,
+    }
+    blocked.update(extra_fields)
+    return blocked
+
+
 def _profile_permission_block(required_operation: str, **extra_fields) -> dict | None:
     """Structured operation-gate denial for gated tools (#69, #142, #897).
 
@@ -14601,6 +14651,10 @@ def _profile_permission_block(required_operation: str, **extra_fields) -> dict |
     # #714: evaluate active profile only — never auto-switch.
     _ensure_matching_profile(required_operation, req_role, extra_fields.get("remote"))
 
+    prov_block = _provenance_mutation_block(**extra_fields)
+    if prov_block is not None:
+        return prov_block
+
     reasons = _profile_operation_gate(required_operation)
     if reasons:
         return _build_operation_gate_refusal(
@@ -14634,6 +14688,10 @@ def _namespace_mutation_block(mutation_task: str, **extra_fields) -> dict | None
     # #714: evaluate active profile only — never auto-switch.
     _ensure_matching_profile(required_permission, required_role, extra_fields.get("remote"))
 
+    prov_block = _provenance_mutation_block(**extra_fields)
+    if prov_block is not None:
+        return prov_block
+
     try:
         profile = get_profile()
     except Exception as exc:
@@ -18081,6 +18139,9 @@ def gitea_get_runtime_context(
         source="gitea_get_runtime_context",
     )
 
+    is_client_managed = _is_client_managed_process()
+    unconsumed_env = gitea_config.get_unconsumed_gitea_env_overrides()
+
     result = {
         "active_profile": profile["profile_name"],
         "authenticated_username": username,
@@ -18097,6 +18158,9 @@ def gitea_get_runtime_context(
         "review_merge_blocked_reasons": blocked_reasons,
         "suggested_fix": suggested_fix,
         "safe_next_action": safe_next_action,
+        "server_provenance": "client_managed" if is_client_managed else "manual_launch",
+        "is_client_managed": is_client_managed,
+        "unconsumed_gitea_env": unconsumed_env,
         "preflight_ready": preflight["preflight_ready"],
         "preflight_block_reasons": preflight["preflight_block_reasons"],
         "preflight_workspace": preflight.get("preflight_workspace"),
@@ -18110,6 +18174,13 @@ def gitea_get_runtime_context(
             PROJECT_ROOT),
     }
 
+    if not is_client_managed:
+        result["safe_next_action"] = (
+            "BLOCKED + RECONNECT: Serving process lacks client-managed launch provenance (manual launch). "
+            "Reconnect the IDE/client-managed MCP server namespace instead of an ad hoc terminal launch."
+        )
+
+
     # #702: read-only visibility into the inherited GITEA_ACTIVE_WORKTREE
     # binding; recovery itself runs during capability resolution.
     try:
@@ -20567,7 +20638,9 @@ def _check_mcp_runtimes_diagnostics(task: str, matching_profiles: list[str]) ->
     self_pid = os.getpid()
     self_stale = False
 
-    running_profiles = {}
+    all_profile_procs: dict[str, list[dict]] = {}
+    unsupported_env_found = set()
+
     for line in proc.stdout.splitlines()[1:]:
         line = line.strip()
         if not line or "mcp_server.py" not in line:
@@ -20599,16 +20672,55 @@ def _check_mcp_runtimes_diagnostics(task: str, matching_profiles: list[str]) ->
         if match:
             profile = match.group(1)
 
+        is_client_managed = bool(
+            re.search(r'\bGITEA_CLIENT_MANAGED=(1|true|yes|client_managed)\b', env_out, re.IGNORECASE)
+            or re.search(r'\bGITEA_MCP_CLIENT_MANAGED=(1|true|yes|client_managed)\b', env_out, re.IGNORECASE)
+            or re.search(r'\bGITEA_SERVER_PROVENANCE=client_managed\b', env_out, re.IGNORECASE)
+        )
+
+        for env_match in re.finditer(r'\b(GITEA_[A-Z0-9_]+)=([^\s]+)', env_out):
+            k, v = env_match.group(1), env_match.group(2)
+            if k not in gitea_config.RECOGNIZED_GITEA_ENV_KEYS and not any(k.startswith(p) for p in gitea_config.RECOGNIZED_GITEA_ENV_PREFIXES):
+                unsupported_env_found.add(f"{k}={v}")
+
         is_stale = (start_time < code_mtime) or git_stale
         if pid == self_pid and is_stale:
             self_stale = True
 
-        if profile not in running_profiles or start_time > running_profiles[profile]["start_time"]:
+        proc_info = {
-            running_profiles[profile] = {
+            "pid": pid,
-                "pid": pid,
+            "start_time": start_time,
-                "start_time": start_time,
+            "is_stale": is_stale,
-                "is_stale": is_stale
+            "is_client_managed": is_client_managed,
-            }
+        }
+        if profile not in all_profile_procs:
+            all_profile_procs[profile] = []
+        all_profile_procs[profile].append(proc_info)
+
+    running_profiles = {}
+    for profile, procs in all_profile_procs.items():
+        if len(procs) > 1:
+            pids_str = ", ".join(str(p["pid"]) for p in procs)
+            reasons.append(
+                f"stale-runtime: Duplicate MCP server process(es) detected for profile '{profile}' (PIDs: {pids_str}). "
+                "Manual or duplicate launches defeat staleness detection and cannot receive client stdio."
+            )
+        client_procs = [p for p in procs if p["is_client_managed"]]
+        if client_procs:
+            client_procs.sort(key=lambda p: p["start_time"], reverse=True)
+            running_profiles[profile] = client_procs[0]
+        else:
+            pids_str = ", ".join(str(p["pid"]) for p in procs)
+            reasons.append(
+                f"stale-runtime: Manually launched MCP process(es) detected without client-managed provenance for profile '{profile}' (PIDs: {pids_str}). "
+                "Manual launches cannot serve client stdio and are ignored for runtime freshness."
+            )
+
+    if unsupported_env_found:
+        reasons.append(
+            f"unsupported-env: Unsupported GITEA_* environment variable override(s) detected: {', '.join(sorted(unsupported_env_found))}. "
+            "Unknown env overrides are unsupported."
+        )
 
     if self_stale:
         # #685: report-only — no config utime, no thread, no os._exit.
@@ -20643,6 +20755,7 @@ def _check_mcp_runtimes_diagnostics(task: str, matching_profiles: list[str]) ->
     return reasons
 
 
+
 @mcp.tool()
 def gitea_resolve_task_capability(
     task: str,

mcp_namespace_health.py

@@ -225,6 +225,16 @@ def classify_namespace_probe(
         # on bad data without treating success as IDE proof).
         blocks = namespace_health_blocks_task("merge_pr", healthy)
 
+    import gitea_config
+    raw_env = process.get("env") if isinstance(process, dict) else None
+    unconsumed_env = gitea_config.get_unconsumed_gitea_env_overrides(raw_env)
+    is_client_managed = bool(
+        env_summary.get("GITEA_CLIENT_MANAGED") in ("1", "true", "yes", "client_managed")
+        or env_summary.get("GITEA_MCP_CLIENT_MANAGED") in ("1", "true", "yes", "client_managed")
+        or env_summary.get("GITEA_SERVER_PROVENANCE") == "client_managed"
+    )
+    provenance = "client_managed" if is_client_managed else "manual_launch"
+
     return {
         "success": healthy,
         "healthy": healthy,
@@ -240,6 +250,9 @@ def classify_namespace_probe(
         "error_message": error_message or None,
         "reasons": reasons,
         "remediation": remediation,
+        "provenance": provenance,
+        "is_client_managed": is_client_managed,
+        "unconsumed_gitea_env": unconsumed_env,
         "diagnostics": {
             "namespace": ns,
             "required_tool": tool,
@@ -248,6 +261,9 @@ def classify_namespace_probe(
             "env": env_summary,
             "config_path": config_path,
             "probe_source": source,
+            "provenance": provenance,
+            "is_client_managed": is_client_managed,
+            "unconsumed_gitea_env": unconsumed_env,
         },
         "blocks_merge_workflow": blocks,
     }

tests/conftest.py

@@ -44,6 +44,8 @@ def _reset_mutation_authority(monkeypatch):
     ]:
         monkeypatch.delenv(env_key, raising=False)
 
+    monkeypatch.setenv("GITEA_CLIENT_MANAGED", "1")
+
     # Isolate durable session-state files so tests never share host cache (#559).
     import tempfile
 

tests/test_commit_files_gate.py

@@ -35,7 +35,7 @@ CONFIG = {
             ],
             "forbidden_operations": [],
             "execution_profile": "full-author",
-        "allowed_repositories": ["Example-Org/Example-Repo"],
+        "allowed_repositories": ["Scaled-Tech-Consulting/Gitea-Tools", "Example-Org/Example-Repo"],
         },
         "reviewer-no-commit": {
             "enabled": True,
@@ -50,7 +50,7 @@ CONFIG = {
                 "gitea.repo.commit", "gitea.pr.create", "gitea.branch.push"
             ],
             "execution_profile": "reviewer-no-commit",
-        "allowed_repositories": ["Example-Org/Example-Repo"],
+        "allowed_repositories": ["Scaled-Tech-Consulting/Gitea-Tools", "Example-Org/Example-Repo"],
         },
     },
     "rules": {"allow_runtime_switching": False},

tests/test_config_menu.py

@@ -175,7 +175,7 @@ class TestLauncherSnippets(unittest.TestCase):
     def test_only_safe_keys_no_secrets(self):
         entry = gitea_config.launcher_entry("prgs", "/cfg/profiles.json")["gitea-tools"]
         self.assertEqual(set(entry), {"command", "args", "env"})
-        self.assertEqual(set(entry["env"]), {"GITEA_MCP_CONFIG", "GITEA_MCP_PROFILE"})
+        self.assertEqual(set(entry["env"]), {"GITEA_MCP_CONFIG", "GITEA_MCP_PROFILE", "GITEA_CLIENT_MANAGED"})
         self.assertEqual(entry["env"]["GITEA_MCP_PROFILE"], "prgs")
         blob = json.dumps(entry).lower()
         for word in ("token", "password", "secret"):

tests/test_issue_686_manual_mcp_provenance.py

@@ -0,0 +1,139 @@
+"""Tests for Issue #686: Detect and reject manually launched duplicate MCP role servers."""
+import os
+import unittest
+from unittest.mock import patch, MagicMock
+from datetime import datetime
+
+import gitea_config
+import gitea_mcp_server
+import mcp_namespace_health
+
+
+class TestIssue686ManualMcpProvenance(unittest.TestCase):
+
+    def test_client_managed_process_detection(self):
+        """Test _is_client_managed_process correctly detects provenance markers."""
+        with patch.dict(os.environ, {"GITEA_CLIENT_MANAGED": "1"}, clear=True):
+            self.assertTrue(gitea_mcp_server._is_client_managed_process())
+
+        with patch.dict(os.environ, {"GITEA_MCP_CLIENT_MANAGED": "true"}, clear=True):
+            self.assertTrue(gitea_mcp_server._is_client_managed_process())
+
+        with patch.dict(os.environ, {"GITEA_SERVER_PROVENANCE": "client_managed"}, clear=True):
+            self.assertTrue(gitea_mcp_server._is_client_managed_process())
+
+        with patch.dict(os.environ, {"GITEA_CLIENT_MANAGED": "0"}, clear=True):
+            self.assertFalse(gitea_mcp_server._is_client_managed_process())
+
+    def test_unconsumed_gitea_env_overrides(self):
+        """Test surfacing of unsupported GITEA_* env overrides (e.g. GITEA_DUMMY)."""
+        env = {
+            "GITEA_MCP_PROFILE": "prgs-author",
+            "GITEA_CLIENT_MANAGED": "1",
+            "GITEA_DUMMY": "2",
+            "GITEA_UNKNOWN_FLAG": "abc",
+        }
+        unconsumed = gitea_config.get_unconsumed_gitea_env_overrides(env)
+        self.assertIn("GITEA_DUMMY", unconsumed)
+        self.assertEqual(unconsumed["GITEA_DUMMY"], "2")
+        self.assertIn("GITEA_UNKNOWN_FLAG", unconsumed)
+        self.assertNotIn("GITEA_MCP_PROFILE", unconsumed)
+        self.assertNotIn("GITEA_CLIENT_MANAGED", unconsumed)
+
+    def test_manual_server_mutation_fail_closed(self):
+        """AC 2: Mutating tools on a server without client-managed provenance fail closed with a typed blocker."""
+        with patch.dict(os.environ, {"GITEA_CLIENT_MANAGED": "0"}, clear=True):
+            block = gitea_mcp_server._provenance_mutation_block(task="create_issue")
+            self.assertIsNotNone(block)
+            self.assertFalse(block["success"])
+            self.assertFalse(block["performed"])
+            self.assertEqual(block["blocker_kind"], "unsupported_manual_launch")
+            self.assertEqual(block["provenance"], "manual_launch")
+            self.assertTrue(any("mutation denied: server process was launched manually" in r for r in block["reasons"]))
+            self.assertIn("BLOCKED + RECONNECT", block["exact_next_action"])
+
+    def test_client_managed_server_mutation_passes_provenance_gate(self):
+        """AC 3: Clean client-managed baseline passes the provenance gate."""
+        with patch.dict(os.environ, {"GITEA_CLIENT_MANAGED": "1"}, clear=True):
+            block = gitea_mcp_server._provenance_mutation_block(task="create_issue")
+            self.assertIsNone(block)
+
+    @patch("subprocess.run")
+    @patch("os.path.getmtime")
+    @patch("os.path.exists")
+    @patch("os.getpid")
+    def test_manual_duplicate_does_not_mask_stale_runtime(
+        self, mock_getpid, mock_exists, mock_getmtime, mock_run
+    ):
+        """AC 1 & AC 3: Staleness detection ignores manual duplicates and reports stale supported runtimes."""
+        mock_getpid.return_value = 12345
+        mock_exists.return_value = True
+
+        code_time = datetime(2026, 7, 8, 14, 0, 0)
+        mock_getmtime.return_value = code_time.timestamp()
+
+        # PID 12345: stale client-managed process (started at 13:00)
+        # PID 99999: fresh manual duplicate process (started at 15:00, no GITEA_CLIENT_MANAGED)
+        ps_output = (
+            "  PID LSTART COMMAND\n"
+            "12345 Wed Jul  8 13:00:00 2026 /path/to/python mcp_server.py\n"
+            "99999 Wed Jul  8 15:00:00 2026 /path/to/python mcp_server.py\n"
+        )
+
+        mock_run_ps = MagicMock()
+        mock_run_ps.stdout = ps_output
+
+        mock_env_12345 = MagicMock()
+        mock_env_12345.stdout = "GITEA_MCP_PROFILE=prgs-author GITEA_CLIENT_MANAGED=1"
+
+        mock_env_99999 = MagicMock()
+        mock_env_99999.stdout = "GITEA_MCP_PROFILE=prgs-author GITEA_DUMMY=2"
+
+        def side_effect(args, **kwargs):
+            if args[0] == "ps" and "eww" in args:
+                pid = args[2]
+                if pid == "12345":
+                    return mock_env_12345
+                elif pid == "99999":
+                    return mock_env_99999
+            elif args[0] == "ps":
+                return mock_run_ps
+            raise ValueError(f"Unexpected args: {args}")
+
+        mock_run.side_effect = side_effect
+
+        reasons = gitea_mcp_server._check_mcp_runtimes_diagnostics("create_issue", ["prgs-author"])
+
+        # Manual duplicate process must be flagged
+        self.assertTrue(any("Duplicate MCP server process(es) detected" in r for r in reasons))
+        # Unsupported env override (GITEA_DUMMY=2) must be flagged
+        self.assertTrue(any("unsupported-env: Unsupported GITEA_* environment variable override(s) detected: GITEA_DUMMY=2" in r for r in reasons))
+        # Stale runtime must NOT be masked by fresh manual process 99999!
+        self.assertTrue(any("All matching profiles for task 'create_issue' (['prgs-author']) are running but stale" in r for r in reasons))
+
+    def test_namespace_health_classification_includes_provenance(self):
+        """AC 1 & 4: mcp_namespace_health diagnostics include provenance and unconsumed_gitea_env."""
+        process = {
+            "pid": 5555,
+            "profile": "prgs-author",
+            "env": {
+                "GITEA_MCP_PROFILE": "prgs-author",
+                "GITEA_DUMMY": "99",
+            },
+        }
+        res = mcp_namespace_health.classify_namespace_probe(
+            "gitea-author",
+            configured=True,
+            registered_tools=["gitea_whoami"],
+            probe_result={"success": True},
+            process=process,
+            probe_source="client_namespace",
+        )
+        self.assertEqual(res["provenance"], "manual_launch")
+        self.assertFalse(res["is_client_managed"])
+        self.assertEqual(res["unconsumed_gitea_env"], {"GITEA_DUMMY": "99"})
+        self.assertEqual(res["diagnostics"]["provenance"], "manual_launch")
+
+
+if __name__ == "__main__":
+    unittest.main()

tests/test_mcp_restart_governance.py

@@ -0,0 +1,478 @@
+"""Concurrent-session MCP restart safety & dogfooding test suite (#666).
+
+Automated test suite proving all 10 dogfooding bullets required by Issue #666:
+1. One LLM cannot restart MCP unilaterally (role-based restart authorization matrix).
+2. New work stops during drain (assignments_stopped gate enforcement).
+3. Active safe work can finish (ack collection / graceful completion before restart).
+4. Unsafe mutations block restart (in-flight author/reviewer mutation gates).
+5. Session state is durably checkpointed (checkpoints_complete validation).
+6. Leases/locks not silently orphaned (lease lifecycle & post-restart lease audit).
+7. Sessions resume or receive canonical next action (reconcile proof canonical next action).
+8. Failed drain creates durable incident work (durable incident descriptor & bridge integration).
+9. Restart of one component does not unnecessarily interrupt unrelated work (scoped restart impact).
+10. Restart/upgrade workflows do not require manual chat reconstruction (state handoff ledger & completion proof).
+
+Links parent #655, vision #652, roadmap #653, #658, #659, #660, #661, #662, #663.
+"""
+
+from __future__ import annotations
+
+import os
+import unittest
+from datetime import datetime, timedelta, timezone
+
+import drain_proof as dp
+import mcp_restart_paths as rp
+import post_restart_reconcile as prr
+import restart_coordinator as rc
+from restart_coordinator import RestartClass
+
+NOW = datetime(2026, 7, 25, 12, 0, 0, tzinfo=timezone.utc)
+SECRET = b"test-secret-dogfooding-issue-666-0123456789"
+
+
+def _live_pid() -> int:
+    return os.getpid()
+
+
+def _clean_drain_state() -> dict:
+    return {
+        "assignments_stopped": True,
+        "checkpoints_complete": True,
+        "handoffs_verified": True,
+        "leases_handled": True,
+        "acks": {},
+        "ack_timeout_policy_applied": False,
+    }
+
+
+def _clean_inventory() -> dict:
+    return {
+        "service_health": {"healthy": True},
+        "clients": [],
+        "sessions": [
+            {
+                "session_id": "prgs-controller-1",
+                "role": "controller",
+                "profile": "prgs-controller",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            }
+        ],
+        "checkpoints": [],
+        "leases": [],
+        "capabilities": {},
+        "worktree_bindings": [],
+        "pending_mutations": [],
+        "inventory_complete": True,
+    }
+
+
+class TestBullet1UnilateralRestartForbidden(unittest.TestCase):
+    """Bullet 1: One LLM cannot restart MCP unilaterally."""
+
+    def test_worker_role_unilateral_full_restart_denied(self):
+        policy = rc.RESTART_CLASS_POLICIES[RestartClass.FULL_MCP_RESTART]
+        for worker_role in ("author", "reviewer", "merger", "reconciler"):
+            self.assertNotIn(
+                worker_role,
+                policy.request_roles,
+                f"Worker role '{worker_role}' must not unilaterally authorize FULL_MCP_RESTART",
+            )
+
+    def test_privileged_role_full_restart_authorized(self):
+        policy = rc.RESTART_CLASS_POLICIES[RestartClass.FULL_MCP_RESTART]
+        for priv_role in ("controller", "operator", "admin"):
+            self.assertIn(
+                priv_role,
+                policy.request_roles,
+                f"Privileged role '{priv_role}' must be authorized for FULL_MCP_RESTART",
+            )
+
+    def test_evaluate_impact_records_unauthorized_worker_request(self):
+        report = rc.evaluate_restart_impact(
+            {"sessions": [], "leases": [], "inventory_complete": True},
+            now=NOW,
+            restart_class=RestartClass.FULL_MCP_RESTART,
+            requester_role="author",
+            requesting_session_id="prgs-author-123",
+        )
+        self.assertFalse(report.role_authorized)
+        self.assertEqual(report.verdict, rc.VERDICT_UNSAFE)
+        self.assertTrue(any("may not request" in r.lower() or "authorization denied" in r.lower() for r in report.reasons))
+
+
+class TestBullet2NewWorkStopsDuringDrain(unittest.TestCase):
+    """Bullet 2: New work stops during drain."""
+
+    def test_assignments_stopped_false_blocks_drain_proof(self):
+        state = _clean_drain_state()
+        state["assignments_stopped"] = False
+
+        impact = rc.evaluate_restart_impact(
+            {"sessions": [], "leases": [], "inventory_complete": True},
+            now=NOW,
+        ).as_dict()
+
+        proof = dp.build_drain_proof(
+            secret=SECRET,
+            impact_report=impact,
+            drain_state=state,
+            now=NOW,
+        )
+
+        self.assertFalse(proof.clean)
+        check = next(c for c in proof.checks if c.name == dp.CHECK_ASSIGNMENTS_STOPPED)
+        self.assertFalse(check.passed)
+
+        gate = dp.gate_apply_restart(proof=proof.as_dict(), secret=SECRET, now=NOW)
+        self.assertEqual(gate.verdict, dp.GATE_DENY)
+        self.assertFalse(gate.allow)
+        self.assertTrue(any("drain proof invalid" in r.lower() or "assignments_stopped" in r.lower() for r in gate.reasons))
+
+
+class TestBullet3ActiveSafeWorkCanFinish(unittest.TestCase):
+    """Bullet 3: Active safe work can finish."""
+
+    def test_active_safe_sessions_ack_allows_clean_drain(self):
+        sessions = [
+            {
+                "session_id": "prgs-controller-1",
+                "role": "controller",
+                "profile": "prgs-controller",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+            {
+                "session_id": "prgs-reviewer-42",
+                "role": "reviewer",
+                "profile": "prgs-reviewer",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+        ]
+        leases = [
+            {
+                "lease_id": "lease-ro",
+                "session_id": "prgs-reviewer-42",
+                "role": "reviewer",
+                "phase": "reviewing",
+                "is_mutating": False,
+                "expires_at": (NOW + timedelta(minutes=5)).isoformat(),
+                "pid": _live_pid(),
+            }
+        ]
+
+        impact = rc.evaluate_restart_impact(
+            {"sessions": sessions, "leases": leases, "inventory_complete": True},
+            now=NOW,
+            requesting_session_id="prgs-controller-1",
+        ).as_dict()
+
+        state = _clean_drain_state()
+        state["acks"] = {"prgs-reviewer-42": "ack"}
+
+        proof = dp.build_drain_proof(
+            secret=SECRET,
+            impact_report=impact,
+            drain_state=state,
+            now=NOW,
+        )
+
+        self.assertTrue(proof.clean)
+        gate = dp.gate_apply_restart(proof=proof.as_dict(), secret=SECRET, now=NOW)
+        self.assertTrue(gate.allow)
+        self.assertEqual(gate.verdict, dp.GATE_ALLOW)
+
+
+class TestBullet4UnsafeMutationsBlockRestart(unittest.TestCase):
+    """Bullet 4: Unsafe mutations block restart."""
+
+    def test_inflight_unsafe_mutation_yields_unsafe_verdict(self):
+        sessions = [
+            {
+                "session_id": "prgs-controller-1",
+                "role": "controller",
+                "profile": "prgs-controller",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+            {
+                "session_id": "prgs-author-99",
+                "role": "author",
+                "profile": "prgs-author",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+        ]
+        leases = [
+            {
+                "lease_id": "lease-mutating",
+                "session_id": "prgs-author-99",
+                "role": "author",
+                "phase": "implementing",
+                "worktree_path": "/Users/jasonwalker/Development/Gitea-Tools/branches/feat-test",
+                "freshness": {"freshness": "active"},
+                "expires_at": (NOW + timedelta(minutes=5)).isoformat(),
+                "pid": _live_pid(),
+            }
+        ]
+
+        report = rc.evaluate_restart_impact(
+            {"sessions": sessions, "leases": leases, "inventory_complete": True},
+            now=NOW,
+            requesting_session_id="prgs-controller-1",
+        )
+
+        self.assertEqual(report.verdict, rc.VERDICT_UNSAFE)
+        self.assertFalse(report.allow_restart)
+        self.assertGreater(len(report.mutations), 0)
+
+        proof = dp.build_drain_proof(
+            secret=SECRET,
+            impact_report=report.as_dict(),
+            drain_state=_clean_drain_state(),
+            now=NOW,
+        )
+
+        self.assertFalse(proof.clean)
+        check = next(c for c in proof.checks if c.name == dp.CHECK_NO_INFLIGHT_MUTATIONS)
+        self.assertFalse(check.passed)
+
+        gate = dp.gate_apply_restart(proof=proof.as_dict(), secret=SECRET, now=NOW)
+        self.assertEqual(gate.verdict, dp.GATE_DENY)
+        self.assertFalse(gate.allow)
+
+
+class TestBullet5DurableSessionCheckpoints(unittest.TestCase):
+    """Bullet 5: Session state is durably checkpointed."""
+
+    def test_incomplete_checkpoints_blocks_drain_proof(self):
+        state = _clean_drain_state()
+        state["checkpoints_complete"] = False
+
+        impact = rc.evaluate_restart_impact(
+            {"sessions": [], "leases": [], "inventory_complete": True},
+            now=NOW,
+        ).as_dict()
+
+        proof = dp.build_drain_proof(
+            secret=SECRET,
+            impact_report=impact,
+            drain_state=state,
+            now=NOW,
+        )
+
+        self.assertFalse(proof.clean)
+        check = next(c for c in proof.checks if c.name == dp.CHECK_CHECKPOINTS_COMPLETE)
+        self.assertFalse(check.passed)
+
+    def test_post_restart_reconcile_audits_checkpoint_dimension(self):
+        inv = _clean_inventory()
+        inv["checkpoints_available"] = True
+        inv["checkpoints"] = [
+            {
+                "session_id": "prgs-author-99",
+                "checkpoint_id": "chk-1",
+                "stale": True,
+            }
+        ]
+
+        proof = prr.reconcile_after_restart(inv, now=NOW, mode=prr.MODE_ENFORCE)
+        chk_item = next(i for i in proof.items if i.dimension == prr.DIM_CHECKPOINTS)
+        self.assertIn(chk_item.status, (prr.ITEM_UNRESOLVED, prr.ITEM_DEGRADED, prr.ITEM_SKIPPED))
+
+
+class TestBullet6LeasesNotSilentlyOrphaned(unittest.TestCase):
+    """Bullet 6: Leases/locks not silently orphaned."""
+
+    def test_unhandled_leases_block_drain_proof(self):
+        state = _clean_drain_state()
+        state["leases_handled"] = False
+
+        impact = rc.evaluate_restart_impact(
+            {"sessions": [], "leases": [], "inventory_complete": True},
+            now=NOW,
+        ).as_dict()
+
+        proof = dp.build_drain_proof(
+            secret=SECRET,
+            impact_report=impact,
+            drain_state=state,
+            now=NOW,
+        )
+
+        self.assertFalse(proof.clean)
+        check = next(c for c in proof.checks if c.name == dp.CHECK_LEASES_HANDLED)
+        self.assertFalse(check.passed)
+
+    def test_post_restart_reconcile_audits_all_leases(self):
+        inv = _clean_inventory()
+        inv["leases"] = [
+            {
+                "lease_id": "lease-orphaned-1",
+                "session_id": "prgs-author-dead",
+                "role": "author",
+                "status": "active",
+                "freshness": "expired",
+                "expires_at": (NOW - timedelta(minutes=10)).isoformat(),
+            }
+        ]
+
+        proof = prr.reconcile_after_restart(inv, now=NOW, mode=prr.MODE_LOG_ONLY)
+        lease_item = next(i for i in proof.items if i.dimension == prr.DIM_LEASES)
+        self.assertIsNotNone(lease_item)
+        self.assertTrue(lease_item.summary)
+
+
+class TestBullet7SessionsResumeOrReceiveNextAction(unittest.TestCase):
+    """Bullet 7: Sessions resume or receive canonical next action."""
+
+    def test_reconcile_provides_canonical_next_action_for_unresolved(self):
+        inv = _clean_inventory()
+        inv["pending_mutations"] = [
+            {
+                "mutation_id": "mut-404",
+                "session_id": "prgs-author-77",
+                "phase": "implementing",
+                "issue_number": 666,
+            }
+        ]
+
+        proof = prr.reconcile_after_restart(inv, now=NOW, mode=prr.MODE_ENFORCE)
+        self.assertEqual(proof.overall_status, prr.STATUS_DEGRADED)
+        self.assertTrue(proof.mutation_hold)
+        self.assertTrue(proof.note)
+        self.assertGreater(len(proof.proposed_follow_ups), 0)
+
+
+class TestBullet8FailedDrainCreatesIncidentWork(unittest.TestCase):
+    """Bullet 8: Failed drain creates durable incident work."""
+
+    def test_denied_drain_gate_mints_durable_incident_descriptor(self):
+        impact = rc.evaluate_restart_impact(
+            {"sessions": [], "leases": [], "inventory_complete": True},
+            now=NOW,
+        ).as_dict()
+
+        state = _clean_drain_state()
+        state["assignments_stopped"] = False
+
+        proof = dp.build_drain_proof(
+            secret=SECRET,
+            impact_report=impact,
+            drain_state=state,
+            now=NOW,
+        )
+
+        gate = dp.gate_apply_restart(proof=proof.as_dict(), secret=SECRET, now=NOW)
+        self.assertEqual(gate.verdict, dp.GATE_DENY)
+
+        incident = gate.incident
+        self.assertIsNotNone(incident)
+        self.assertEqual(incident["kind"], "restart_drain_gate_denied")
+        self.assertTrue(any("assignments_stopped" in r for r in incident["reasons"]))
+
+
+class TestBullet9ScopedRestartNonInterference(unittest.TestCase):
+    """Bullet 9: Restart of one component does not unnecessarily interrupt unrelated work."""
+
+    def test_scoped_role_restart_impacts_only_target_role(self):
+        sessions = [
+            {
+                "session_id": "prgs-controller-1",
+                "role": "controller",
+                "profile": "prgs-controller",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+            {
+                "session_id": "prgs-author-10",
+                "role": "author",
+                "profile": "prgs-author",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+            {
+                "session_id": "prgs-reviewer-20",
+                "role": "reviewer",
+                "profile": "prgs-reviewer",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+        ]
+
+        policy = rc.RESTART_CLASS_POLICIES[RestartClass.ROLE_RUNTIME_RESTART]
+        report = rc.evaluate_restart_impact(
+            {"sessions": sessions, "leases": [], "inventory_complete": True},
+            now=NOW,
+            restart_class=RestartClass.ROLE_RUNTIME_RESTART,
+            target_role="reviewer",
+            requesting_session_id="prgs-controller-1",
+            requester_role="controller",
+            requester_permissions=list(policy.request_roles),
+            controller_approved=True,
+        )
+
+        self.assertTrue(report.role_authorized)
+
+    def test_scoped_connector_restart_limits_blast_radius(self):
+        sessions = [
+            {
+                "session_id": "prgs-author-10",
+                "role": "author",
+                "connector": "gitea-author",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+            {
+                "session_id": "prgs-reviewer-20",
+                "role": "reviewer",
+                "connector": "gitea-reviewer",
+                "pid": _live_pid(),
+                "status": "active",
+                "last_heartbeat_at": NOW.isoformat(),
+            },
+        ]
+
+        policy = rc.RESTART_CLASS_POLICIES[RestartClass.CONNECTOR_RESTART]
+        report = rc.evaluate_restart_impact(
+            {"sessions": sessions, "leases": [], "inventory_complete": True},
+            now=NOW,
+            restart_class=RestartClass.CONNECTOR_RESTART,
+            target_connector="gitea-author",
+            requesting_session_id="prgs-controller-1",
+            requester_role="controller",
+            requester_permissions=list(policy.request_roles),
+            controller_approved=True,
+        )
+
+        self.assertIsNotNone(report)
+
+
+class TestBullet10NoManualChatReconstruction(unittest.TestCase):
+    """Bullet 10: Restart/upgrade workflows do not require manual chat reconstruction."""
+
+    def test_end_to_end_restart_reconcile_handoff_proof(self):
+        inv = _clean_inventory()
+        proof = prr.reconcile_after_restart(inv, now=NOW, mode=prr.MODE_LOG_ONLY)
+
+        proof_dict = proof.as_dict()
+        self.assertEqual(proof_dict["overall_status"], prr.STATUS_COMPLETE)
+        self.assertFalse(proof_dict["mutation_hold"])
+        self.assertTrue(proof_dict["note"])
+        self.assertIn("links", proof_dict)
+        self.assertEqual(proof_dict["links"]["umbrella"], 655)
+
+
+if __name__ == "__main__":
+    unittest.main()

tests/test_mcp_stale_runtime.py

@@ -35,10 +35,10 @@ class TestMcpStaleRuntime(unittest.TestCase):
         
         # Mock env output for ps eww
         mock_run_env12345 = MagicMock()
-        mock_run_env12345.stdout = "GITEA_MCP_PROFILE=prgs-reconciler"
+        mock_run_env12345.stdout = "GITEA_MCP_PROFILE=prgs-reconciler GITEA_CLIENT_MANAGED=1"
         
         mock_run_env54321 = MagicMock()
-        mock_run_env54321.stdout = "GITEA_MCP_PROFILE=prgs-author"
+        mock_run_env54321.stdout = "GITEA_MCP_PROFILE=prgs-author GITEA_CLIENT_MANAGED=1"
         
         def side_effect(args, **kwargs):
             if args[0] == "ps" and "eww" in args:
@@ -91,7 +91,7 @@ class TestMcpStaleRuntime(unittest.TestCase):
         mock_run_ps.stdout = ps_output
 
         mock_run_env = MagicMock()
-        mock_run_env.stdout = "GITEA_MCP_PROFILE=prgs-author"
+        mock_run_env.stdout = "GITEA_MCP_PROFILE=prgs-author GITEA_CLIENT_MANAGED=1"
 
         mock_run_git = MagicMock()
         mock_run_git.stdout = "FAKE2" # different SHA

tests/test_runtime_clarity.py

@@ -243,9 +243,10 @@ class TestRuntimeClarity(unittest.TestCase):
         self.assertIn("switching is disabled", res["message"].lower())
         self.assertIsNone(gitea_config._active_profile_override)
 
+    @patch("mcp_server._trusted_session_repository", return_value={"repository": "Example-Org/Example-Repo", "org": "Example-Org", "repo": "Example-Repo", "reasons": []})
     @patch("mcp_server.api_request")
     @patch("mcp_server.get_auth_header")
-    def test_activate_profile_succeeds_when_enabled(self, mock_auth, mock_api):
+    def test_activate_profile_succeeds_when_enabled(self, mock_auth, mock_api, mock_trusted):
         self._write_config(CONFIG_SWITCHING_ENABLED)
 
         # Setup mock responses for whoami checks